PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID SapurV1A.0826s0010.1.p
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Salicaceae; Saliceae; Salix
Family ERF
Protein Properties Length: 319aa    MW: 34442.1 Da    PI: 8.1135
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
SapurV1A.0826s0010.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP266.35.8e-21123173256
                     AP2   2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkklege 56 
                             +y+GVr+++ +g+W+AeIrdp+    + +r++lg+f+tae Aa+a+++a+++++g+
  SapurV1A.0826s0010.1.p 123 KYRGVRRRP-WGKWAAEIRDPV----KaARVWLGTFDTAEAAARAYDEAALRFRGN 173
                             8********.**********64....55*************************985 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:3.30.730.101.2E-32122181IPR001471AP2/ERF domain
CDDcd000181.79E-21123182No hitNo description
PfamPF008473.2E-14123172IPR001471AP2/ERF domain
PROSITE profilePS5103226.028123180IPR001471AP2/ERF domain
SuperFamilySSF541716.54E-23123181IPR016177DNA-binding domain
SMARTSM003803.1E-36123186IPR001471AP2/ERF domain
PRINTSPR003679.5E-12124135IPR001471AP2/ERF domain
PRINTSPR003679.5E-12146162IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 319 aa     Download sequence    Send to blast
MLSESSRERE MSIMVAALTH VVAGNVPADD SDSLTAVSNN QGDCFHGGLS AKREREEEDG  60
GGGEVDKGLC RAFGDDFLHG GSSSAGRGIS IVGTSSIAPA SKQMAFTPVY EYNETHRDEP  120
QRKYRGVRRR PWGKWAAEIR DPVKAARVWL GTFDTAEAAA RAYDEAALRF RGNKAKLNFP  180
ENAKLRPSPP HNPAANQLTV SDSQSPGLLS LPPSSMPMLH SSHAQKREIS REKVAQPQWI  240
LGGGGYQRQP VSLYDQMFMS SSFVSSNSSS SSTQPSDPMF FPAQEPGGFR HANSSQSGGK  300
DFQLPAWSGC SHYTSSSR*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2gcc_A1e-21124180663ATERF1
3gcc_A1e-21124180663ATERF1
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011025557.11e-154PREDICTED: ethylene-responsive transcription factor ABR1-like
SwissprotQ9FGF83e-42ABR1_ARATH; Ethylene-responsive transcription factor ABR1
TrEMBLB9HGC61e-145B9HGC6_POPTR; Uncharacterized protein
STRINGPOPTR_0007s07090.11e-144(Populus trichocarpa)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF49333254
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G33710.14e-20ERF family protein